Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm4510-201ENSMUST00000218265 427 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm36262-201ENSMUST00000223274 499 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm20486-201ENSMUST00000101544 128 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm23162-201ENSMUST00000175081 121 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm24081-201ENSMUST00000175177 125 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm28080-201ENSMUST00000188552 722 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm21524-201ENSMUST00000190499 696 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm21715-201ENSMUST00000191056 694 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm19182-201ENSMUST00000207139 577 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm33178-201ENSMUST00000212090 257 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm18405-201ENSMUST00000220743 511 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AV026068-220ENSMUST00000224153 1147 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdc40Q9DC48 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm12193-201ENSMUST00000117250 379 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm13121-201ENSMUST00000120637 632 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm7931-201ENSMUST00000121537 271 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm24065-201ENSMUST00000157487 264 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm24395-201ENSMUST00000158139 125 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm20480-201ENSMUST00000173953 250 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm36939-201ENSMUST00000194889 439 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm44382-201ENSMUST00000198683 122 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm5886-202ENSMUST00000203957 522 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm9088-201ENSMUST00000220237 508 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms