Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm25083-201ENSMUST00000102319 92 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm23294-201ENSMUST00000104150 164 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm23834-201ENSMUST00000104436 129 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm12322-201ENSMUST00000121605 389 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm24130-201ENSMUST00000158536 151 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm4207-201ENSMUST00000173144 960 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm22548-201ENSMUST00000174899 78 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm29492-201ENSMUST00000187124 457 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm7626-201ENSMUST00000195801 353 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm43040-201ENSMUST00000202399 558 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm18290-201ENSMUST00000202900 844 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm2691-201ENSMUST00000203205 901 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm45473-201ENSMUST00000211452 616 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm22300-201ENSMUST00000082661 126 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm22581-201ENSMUST00000083735 136 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm10205-201ENSMUST00000087431 234 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm10780-201ENSMUST00000099459 285 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.94□□□□□ -1.46
Sf3a3Q9D554 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm15933-201ENSMUST00000117215 616 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm11227-201ENSMUST00000119774 471 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm6142-201ENSMUST00000120290 325 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm12399-201ENSMUST00000121475 446 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm26000-201ENSMUST00000157991 107 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm27295-201ENSMUST00000184264 153 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm43576-201ENSMUST00000197937 871 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29736-201ENSMUST00000198189 385 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm42593-201ENSMUST00000198469 377 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm42516-201ENSMUST00000198691 767 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm29759-201ENSMUST00000205860 327 ntBASIC5.93□□□□□ -1.46
Sf3a3Q9D554 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sf3a3Q9D554 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms