Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm14842-201ENSMUST00000119577 269 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm12438-201ENSMUST00000122034 336 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Mir1953-201ENSMUST00000157866 89 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm23279-201ENSMUST00000157912 97 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm20614-201ENSMUST00000177106 632 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm27004-201ENSMUST00000183300 727 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm5260-201ENSMUST00000186157 949 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm2979-201ENSMUST00000193442 463 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm37883-201ENSMUST00000194970 725 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm43779-201ENSMUST00000196691 829 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm44319-201ENSMUST00000196974 93 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm7181-201ENSMUST00000202197 434 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm44252-201ENSMUST00000204187 330 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm6104-201ENSMUST00000078030 603 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.52□□□□□ -1.53
Use1Q9CQ56 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.52□□□□□ -1.53
Use1Q9CQ56 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm22284-201ENSMUST00000104132 132 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm23294-201ENSMUST00000104150 164 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm13991-201ENSMUST00000120190 648 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm12504-202ENSMUST00000148026 306 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm22915-201ENSMUST00000157615 136 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm17223-201ENSMUST00000171413 481 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm17511-201ENSMUST00000172206 342 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm18689-201ENSMUST00000203969 902 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm17834-201ENSMUST00000204322 891 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.51□□□□□ -1.53
Use1Q9CQ56 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Use1Q9CQ56 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Use1Q9CQ56 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms