Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cstf1Q99LC2 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.03□□□□□ -1.44
Cstf1Q99LC2 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cstf1Q99LC2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.03□□□□□ -1.44
Cstf1Q99LC2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cstf1Q99LC2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cstf1Q99LC2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Cstf1Q99LC2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm25415-201ENSMUST00000104220 132 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm26146-201ENSMUST00000104478 185 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm14659-201ENSMUST00000117667 843 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm15766-201ENSMUST00000118025 813 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm12308-201ENSMUST00000120440 389 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm24735-201ENSMUST00000158859 118 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm22094-201ENSMUST00000158976 117 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm8506-201ENSMUST00000186661 829 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm22300-201ENSMUST00000082661 126 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cstf1Q99LC2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm13604-201ENSMUST00000119332 482 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm13207-201ENSMUST00000119862 773 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm12685-201ENSMUST00000121702 214 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms