Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm45008-201ENSMUST00000206420 493 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm45574-201ENSMUST00000210921 331 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm10095-201ENSMUST00000222765 483 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm14115-201ENSMUST00000119242 482 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm14331-201ENSMUST00000120396 409 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm23408-201ENSMUST00000158523 265 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm43945-201ENSMUST00000203595 754 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Nup88Q8CEC0 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.93□□□□□ -1.3
Nup88Q8CEC0 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm15801-201ENSMUST00000120920 522 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm8783-201ENSMUST00000159764 522 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm22690-201ENSMUST00000175054 110 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm22932-201ENSMUST00000175510 72 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm27006-201ENSMUST00000182218 943 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Mir7020-201ENSMUST00000183787 70 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm37774-201ENSMUST00000194401 245 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Mir6906-201ENSMUST00000198998 58 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm5582-201ENSMUST00000075251 522 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms