Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trub1Q8C0D0 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm14115-201ENSMUST00000119242 482 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm14267-201ENSMUST00000119751 496 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm22867-201ENSMUST00000157499 109 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm22599-201ENSMUST00000157597 132 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm3715-201ENSMUST00000172308 617 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm7745-201ENSMUST00000182235 973 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Mir6952-201ENSMUST00000185092 61 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm42646-201ENSMUST00000202233 914 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm20786-201ENSMUST00000212649 436 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm7042-201ENSMUST00000223027 384 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Olfr519-201ENSMUST00000084752 960 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.96□□□□□ -1.46
Trub1Q8C0D0 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm13866-201ENSMUST00000118901 968 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm13991-201ENSMUST00000120190 648 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm24303-201ENSMUST00000178237 126 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm44239-201ENSMUST00000204228 271 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm18329-201ENSMUST00000215832 589 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm5612-201ENSMUST00000053326 375 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Naip3-201ENSMUST00000118082 4208 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms