Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm43516-201ENSMUST00000196891 322 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Igkv3-8-201ENSMUST00000197635 339 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm43054-201ENSMUST00000199495 884 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm44795-201ENSMUST00000205496 319 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm38372-201ENSMUST00000194854 4028 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm42513-201ENSMUST00000197831 2119 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm25919-201ENSMUST00000104271 132 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Mir1970-201ENSMUST00000157839 104 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm42522-201ENSMUST00000196071 255 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm7733-201ENSMUST00000199038 919 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC166358.3-201ENSMUST00000221456 181 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC125543.4-201ENSMUST00000223385 117 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC122858.1-201ENSMUST00000226212 433 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC122858.3-201ENSMUST00000226341 740 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 AC122858.1-202ENSMUST00000228290 986 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm22807-201ENSMUST00000082737 129 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp47Q8BY87 Gm43488-201ENSMUST00000198874 2504 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC8.18□□□□□ -1.1
Usp47Q8BY87 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm37132-201ENSMUST00000195553 2238 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm8980-201ENSMUST00000140232 2197 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 AC116950.1-201ENSMUST00000226322 3250 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Klra13-ps-201ENSMUST00000125813 802 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm23250-201ENSMUST00000157444 267 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm26069-201ENSMUST00000157497 277 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm25489-201ENSMUST00000158727 141 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm23774-201ENSMUST00000158990 131 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm3008-201ENSMUST00000160566 571 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm28883-201ENSMUST00000189256 369 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm31306-201ENSMUST00000197517 508 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm43973-201ENSMUST00000203562 210 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm45082-201ENSMUST00000206082 601 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm19174-201ENSMUST00000216944 956 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm6104-201ENSMUST00000078030 603 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp47Q8BY87 Gm38062-201ENSMUST00000192541 1856 ntBASIC8.17□□□□□ -1.1
Usp47Q8BY87 Fam35a-206ENSMUST00000228626 3100 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 AC120375.1-201ENSMUST00000227034 3612 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm15715-201ENSMUST00000118032 283 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm26595-201ENSMUST00000181585 484 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm29072-201ENSMUST00000191149 678 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm45874-201ENSMUST00000212423 346 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm10709-201ENSMUST00000213318 480 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms