Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm38291-201ENSMUST00000193671 259 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Ighv1-45-201ENSMUST00000193677 352 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm44225-201ENSMUST00000203582 186 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm17988-201ENSMUST00000208796 535 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm45379-201ENSMUST00000211772 549 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 AC166358.9-201ENSMUST00000220653 375 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 CT009733.1-203ENSMUST00000224033 451 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm22543-201ENSMUST00000104347 94 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm8501-201ENSMUST00000117684 432 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm13245-201ENSMUST00000119646 260 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm13489-201ENSMUST00000121234 971 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vis1-201ENSMUST00000183957 201 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm28443-201ENSMUST00000189081 698 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm28437-201ENSMUST00000190277 783 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm42796-201ENSMUST00000199913 1087 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 LOC665443-201ENSMUST00000212284 796 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC110816.1-201ENSMUST00000218559 980 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC132384.3-201ENSMUST00000219709 472 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC168056.2-201ENSMUST00000223591 269 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 AC163664.1-201ENSMUST00000226251 1248 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm26163-201ENSMUST00000083792 178 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 n-R5s69-201ENSMUST00000083872 119 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp40Q8BWR4 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm8750-201ENSMUST00000173278 1537 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm4954-201ENSMUST00000135069 1601 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm22730-201ENSMUST00000158085 171 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm16139-201ENSMUST00000160015 420 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm8323-201ENSMUST00000168436 1201 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm20480-201ENSMUST00000173953 250 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms