Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm37686-201ENSMUST00000194099 2309 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm17101-201ENSMUST00000169520 1588 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm11737-201ENSMUST00000118713 468 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm22106-201ENSMUST00000122544 127 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm38283-201ENSMUST00000193041 695 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 AC132104.1-201ENSMUST00000213615 260 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 AC153544.1-201ENSMUST00000217988 400 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 n-R5s69-201ENSMUST00000083872 119 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx55Q6ZPL9 Gm44255-201ENSMUST00000203456 2053 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm45001-201ENSMUST00000208279 2515 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm14510-201ENSMUST00000116165 1092 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm13193-201ENSMUST00000117275 225 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm5381-201ENSMUST00000117975 1250 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm4910-201ENSMUST00000119605 366 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm13121-201ENSMUST00000120637 632 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm25824-201ENSMUST00000157092 121 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm26489-201ENSMUST00000157880 264 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm23224-201ENSMUST00000158122 271 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm24216-201ENSMUST00000158259 117 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm8604-201ENSMUST00000183150 965 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm27355-201ENSMUST00000185045 128 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm29551-201ENSMUST00000190913 698 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm44865-201ENSMUST00000207240 531 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 CT030194.2-201ENSMUST00000225752 379 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 AC116724.1-201ENSMUST00000227900 972 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm37621-201ENSMUST00000194716 5531 ntBASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ddx55Q6ZPL9 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms