Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm24924-201ENSMUST00000084007 164 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm19136-201ENSMUST00000190706 2067 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm38090-201ENSMUST00000195733 1942 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 AC159264.1-202ENSMUST00000224856 3162 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm6679-201ENSMUST00000191467 1869 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim41Q5NCC3 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim41Q5NCC3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm2348-201ENSMUST00000108782 300 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm4886-201ENSMUST00000121874 1176 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm12778-201ENSMUST00000122341 333 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 n-R5s207-201ENSMUST00000122497 118 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm25979-201ENSMUST00000157177 138 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Mir1929-201ENSMUST00000158635 93 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm24228-201ENSMUST00000158829 129 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm17154-201ENSMUST00000165748 431 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm24756-201ENSMUST00000177002 96 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm7426-201ENSMUST00000179046 404 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm18305-201ENSMUST00000216532 2128 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm18863-201ENSMUST00000217004 1299 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm44669-201ENSMUST00000207774 1969 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Gm45182-201ENSMUST00000207579 2404 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 AC156645.1-201ENSMUST00000223066 5194 ntBASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim41Q5NCC3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm13100-201ENSMUST00000117157 1439 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm38173-201ENSMUST00000193126 2314 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 CT009757.4-201ENSMUST00000221520 2541 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm11533-201ENSMUST00000120287 477 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm12307-201ENSMUST00000120581 590 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm24545-201ENSMUST00000158651 85 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm16236-201ENSMUST00000159588 379 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm26738-201ENSMUST00000181312 601 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Mir6903-201ENSMUST00000183597 88 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm5260-201ENSMUST00000186157 949 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Trbv22-201ENSMUST00000191697 291 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm37353-201ENSMUST00000194497 313 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms