Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm12317-201ENSMUST00000122307 319 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm29299-201ENSMUST00000185609 923 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm29573-201ENSMUST00000190291 919 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm38022-201ENSMUST00000191762 403 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm38279-201ENSMUST00000194067 1131 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm43850-201ENSMUST00000202021 578 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm7946-201ENSMUST00000203326 958 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm44135-201ENSMUST00000205221 368 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm17984-201ENSMUST00000205286 859 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC151843.1-201ENSMUST00000215960 691 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC164424.1-201ENSMUST00000221690 170 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC156790.3-201ENSMUST00000226200 254 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Mir16-2-201ENSMUST00000083672 95 ntBASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp48Q3V0C5 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms