Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm24719-201ENSMUST00000157520 110 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm16531-201ENSMUST00000180658 967 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm5066-201ENSMUST00000188479 822 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm42824-201ENSMUST00000199361 247 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.5□□□□□ -1.37
CiitaP79621 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CiitaP79621 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CiitaP79621 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CiitaP79621 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CiitaP79621 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.5□□□□□ -1.37
CiitaP79621 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CiitaP79621 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.5□□□□□ -1.37
CiitaP79621 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CiitaP79621 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CiitaP79621 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm15331-201ENSMUST00000120225 385 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm11990-201ENSMUST00000121505 897 ntBASIC6.49□□□□□ -1.37
CiitaP79621 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm26167-201ENSMUST00000158423 253 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.49□□□□□ -1.37
CiitaP79621 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.49□□□□□ -1.37
CiitaP79621 Gm36378-201ENSMUST00000201709 388 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm44053-201ENSMUST00000203364 929 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm19900-201ENSMUST00000207285 576 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm44984-201ENSMUST00000207802 394 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm19195-201ENSMUST00000222018 511 ntBASIC6.49□□□□□ -1.37
CiitaP79621 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.49□□□□□ -1.37
CiitaP79621 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.49□□□□□ -1.37
CiitaP79621 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Mir298-201ENSMUST00000083476 82 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Gm24029-201ENSMUST00000083928 143 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CiitaP79621 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CiitaP79621 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.49□□□□□ -1.37
CiitaP79621 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CiitaP79621 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CiitaP79621 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CiitaP79621 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
CiitaP79621 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CiitaP79621 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CiitaP79621 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CiitaP79621 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm13013-201ENSMUST00000119087 523 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.48□□□□□ -1.37
CiitaP79621 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.48□□□□□ -1.37
CiitaP79621 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Gm22867-201ENSMUST00000157499 109 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm26169-201ENSMUST00000158420 135 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms