Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm20637-201ENSMUST00000175715 462 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm26570-201ENSMUST00000180672 342 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm5181-201ENSMUST00000183140 971 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm21728-201ENSMUST00000188442 695 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm21889-201ENSMUST00000188487 695 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm20932-201ENSMUST00000189115 694 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm21920-201ENSMUST00000190042 695 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm17895-201ENSMUST00000194028 874 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm42622-201ENSMUST00000197229 355 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm43226-201ENSMUST00000202438 259 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm6261-201ENSMUST00000204707 760 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm9367-201ENSMUST00000205703 546 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 AC079644.1-201ENSMUST00000220586 405 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 AC131085.1-201ENSMUST00000224746 656 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm6887-201ENSMUST00000080945 482 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm24207-201ENSMUST00000082781 108 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Sf3b6P59708 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm13310-201ENSMUST00000120962 1381 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm43498-201ENSMUST00000202002 1486 ntBASIC6.14□□□□□ -1.43
Sf3b6P59708 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.14□□□□□ -1.43
Sf3b6P59708 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sf3b6P59708 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sf3b6P59708 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sf3b6P59708 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm14631-201ENSMUST00000119067 594 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm13473-201ENSMUST00000119289 367 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm12994-201ENSMUST00000119601 447 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm13751-201ENSMUST00000120280 752 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm6568-201ENSMUST00000122274 697 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sf3b6P59708 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm16026-205ENSMUST00000162923 641 ntBASIC6.13□□□□□ -1.43
Sf3b6P59708 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms