Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.95□□□□□ -0.98
Cux1P53564 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cux1P53564 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Gm12732-201ENSMUST00000121688 180 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm25603-201ENSMUST00000158361 105 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Mir3062-201ENSMUST00000174986 105 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cux1P53564 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cux1P53564 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cux1P53564 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.94□□□□□ -0.98
Cux1P53564 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Gm7079-201ENSMUST00000119726 171 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC8.94□□□□□ -0.98
Cux1P53564 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC8.94□□□□□ -0.98
Cux1P53564 Gm29240-201ENSMUST00000187248 286 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Gm18036-201ENSMUST00000195256 272 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Gm44456-201ENSMUST00000196554 89 ntBASIC8.94□□□□□ -0.98
Cux1P53564 AC158803.2-201ENSMUST00000219452 679 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Gm18591-201ENSMUST00000220568 763 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Gm18618-201ENSMUST00000222211 473 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cux1P53564 Gm23624-201ENSMUST00000082463 321 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cux1P53564 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.94□□□□□ -0.98
Cux1P53564 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cux1P53564 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.93□□□□□ -0.98
Cux1P53564 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Cux1P53564 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cux1P53564 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cux1P53564 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Gm22650-201ENSMUST00000175138 105 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Mir8097-201ENSMUST00000185150 119 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Gm29376-201ENSMUST00000189357 835 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC8.93□□□□□ -0.98
Cux1P53564 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC8.93□□□□□ -0.98
Cux1P53564 Gm19189-201ENSMUST00000221689 754 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Clec2j-201ENSMUST00000032517 515 ntBASIC8.93□□□□□ -0.98
Cux1P53564 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cux1P53564 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Cux1P53564 AC122881.1-201ENSMUST00000225757 2695 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Cux1P53564 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Gm7609-204ENSMUST00000161424 461 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Gm29284-201ENSMUST00000188363 255 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC8.92□□□□□ -0.98
Cux1P53564 Gm45660-201ENSMUST00000210267 151 ntBASIC8.92□□□□□ -0.98
Cux1P53564 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.92□□□□□ -0.98
Cux1P53564 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 AC129085.4-201ENSMUST00000224536 570 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Gm37913-201ENSMUST00000192925 2544 ntBASIC8.92□□□□□ -0.98
Cux1P53564 AC121960.2-201ENSMUST00000227349 3446 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms