Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm7266-201ENSMUST00000187999 405 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm8241-201ENSMUST00000189286 816 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm37700-201ENSMUST00000192617 965 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm43561-201ENSMUST00000199866 448 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Shmt1P50431 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm18628-201ENSMUST00000220584 475 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Shmt1P50431 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Shmt1P50431 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 BC055308-201ENSMUST00000193380 2538 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm13114-201ENSMUST00000117605 106 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm12577-201ENSMUST00000119701 574 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm13532-201ENSMUST00000120373 240 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.57□□□□□ -1.36
Shmt1P50431 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm2966-201ENSMUST00000166052 481 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm17366-201ENSMUST00000167629 187 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm17204-201ENSMUST00000167936 478 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm20689-201ENSMUST00000176033 279 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm38097-201ENSMUST00000192936 439 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm18445-201ENSMUST00000195502 774 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm19233-201ENSMUST00000219772 936 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 AC132237.2-201ENSMUST00000221702 1209 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm2614-201ENSMUST00000223227 403 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Shmt1P50431 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Shmt1P50431 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm23448-201ENSMUST00000083151 104 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Shmt1P50431 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Shmt1P50431 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Shmt1P50431 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Shmt1P50431 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.57□□□□□ -1.36
Shmt1P50431 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.56□□□□□ -1.36
Shmt1P50431 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms