Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm17952-201ENSMUST00000193914 747 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm37288-201ENSMUST00000193963 334 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm18864-201ENSMUST00000194518 1051 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43147-201ENSMUST00000196944 542 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43141-201ENSMUST00000199695 274 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm44353-201ENSMUST00000200618 138 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm43198-201ENSMUST00000200927 326 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm18410-201ENSMUST00000207199 577 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm44623-201ENSMUST00000207934 434 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Rfx1P48377 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 AC154724.1-201ENSMUST00000225782 821 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 CT009550.5-201ENSMUST00000226286 382 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 AC140209.1-204ENSMUST00000226736 739 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm28392-201ENSMUST00000077630 393 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm24451-201ENSMUST00000083353 133 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
Rfx1P48377 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm43369-201ENSMUST00000196373 1552 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm8421-201ENSMUST00000119439 305 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm11404-201ENSMUST00000120872 494 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm11263-201ENSMUST00000121853 749 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm22311-201ENSMUST00000158006 110 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm17085-201ENSMUST00000165425 502 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm17022-201ENSMUST00000166415 922 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm18833-201ENSMUST00000173218 862 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm27163-201ENSMUST00000184767 409 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm29369-201ENSMUST00000190674 615 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm43664-201ENSMUST00000196038 734 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm42464-202ENSMUST00000198111 774 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm38395-201ENSMUST00000199904 830 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm30708-201ENSMUST00000202183 312 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm44590-201ENSMUST00000206161 391 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm45228-201ENSMUST00000206585 352 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm7368-201ENSMUST00000213307 367 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Rfx1P48377 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm9628-201ENSMUST00000222169 725 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm18388-201ENSMUST00000222339 557 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Rfx1P48377 AC112972.1-201ENSMUST00000227329 365 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Rfx1P48377 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Rfx1P48377 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms