Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.95□□□□□ -1.46
HttP42859 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.95□□□□□ -1.46
HttP42859 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm9006-201ENSMUST00000165520 841 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm24103-201ENSMUST00000174930 77 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm23872-201ENSMUST00000175432 77 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.95□□□□□ -1.46
HttP42859 Gm37670-201ENSMUST00000193622 229 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm42459-201ENSMUST00000199679 742 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Gm18628-201ENSMUST00000220584 475 ntBASIC5.95□□□□□ -1.46
HttP42859 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.95□□□□□ -1.46
HttP42859 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
HttP42859 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.95□□□□□ -1.46
HttP42859 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.95□□□□□ -1.46
HttP42859 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
HttP42859 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
HttP42859 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.95□□□□□ -1.46
HttP42859 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Gm26595-201ENSMUST00000181585 484 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.95□□□□□ -1.46
HttP42859 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.95□□□□□ -1.46
HttP42859 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HttP42859 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HttP42859 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HttP42859 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HttP42859 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.95□□□□□ -1.46
HttP42859 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.95□□□□□ -1.46
HttP42859 Gm14037-201ENSMUST00000120576 313 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm22613-201ENSMUST00000122679 292 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.94□□□□□ -1.46
HttP42859 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HttP42859 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Gm6820-201ENSMUST00000188803 2173 ntBASIC5.94□□□□□ -1.46
HttP42859 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
HttP42859 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Gm5942-201ENSMUST00000120046 439 ntBASIC5.94□□□□□ -1.46
HttP42859 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.94□□□□□ -1.46
HttP42859 Gm10784-201ENSMUST00000178715 238 ntBASIC5.94□□□□□ -1.46
HttP42859 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
HttP42859 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.94□□□□□ -1.46
HttP42859 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.94□□□□□ -1.46
HttP42859 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.94□□□□□ -1.46
HttP42859 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
HttP42859 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Gm12884-201ENSMUST00000120371 325 ntBASIC5.94□□□□□ -1.46
HttP42859 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.94□□□□□ -1.46
HttP42859 Gm15501-202ENSMUST00000140687 625 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm25665-201ENSMUST00000157695 110 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm22725-201ENSMUST00000158092 110 ntBASIC5.94□□□□□ -1.46
HttP42859 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.94□□□□□ -1.46
HttP42859 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.94□□□□□ -1.46
HttP42859 Gm23796-201ENSMUST00000084011 160 ntBASIC5.94□□□□□ -1.46
HttP42859 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
HttP42859 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
HttP42859 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HttP42859 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms