Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.66□□□□□ -1.5
TP20293 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.66□□□□□ -1.5
TP20293 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.66□□□□□ -1.5
TP20293 Gm37191-201ENSMUST00000193346 388 ntBASIC5.66□□□□□ -1.5
TP20293 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 Gm2602-201ENSMUST00000202112 571 ntBASIC5.66□□□□□ -1.5
TP20293 Gm18290-201ENSMUST00000202900 844 ntBASIC5.66□□□□□ -1.5
TP20293 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.66□□□□□ -1.5
TP20293 Gm43974-201ENSMUST00000205080 684 ntBASIC5.66□□□□□ -1.5
TP20293 Gm8863-201ENSMUST00000216630 926 ntBASIC5.66□□□□□ -1.5
TP20293 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.66□□□□□ -1.5
TP20293 Gm9292-201ENSMUST00000222008 710 ntBASIC5.66□□□□□ -1.5
TP20293 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.66□□□□□ -1.5
TP20293 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.66□□□□□ -1.5
TP20293 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.66□□□□□ -1.5
TP20293 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TP20293 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TP20293 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.65□□□□□ -1.5
TP20293 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.65□□□□□ -1.5
TP20293 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.65□□□□□ -1.5
TP20293 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.65□□□□□ -1.5
TP20293 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TP20293 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
TP20293 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TP20293 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TP20293 Gm25795-201ENSMUST00000104421 132 ntBASIC5.65□□□□□ -1.5
TP20293 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm13811-201ENSMUST00000117800 256 ntBASIC5.65□□□□□ -1.5
TP20293 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TP20293 Gm12396-201ENSMUST00000121600 306 ntBASIC5.65□□□□□ -1.5
TP20293 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.65□□□□□ -1.5
TP20293 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.65□□□□□ -1.5
TP20293 Gm23553-201ENSMUST00000157817 295 ntBASIC5.65□□□□□ -1.5
TP20293 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TP20293 Gm8367-201ENSMUST00000186145 887 ntBASIC5.65□□□□□ -1.5
TP20293 Gm28871-201ENSMUST00000186191 687 ntBASIC5.65□□□□□ -1.5
TP20293 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC5.65□□□□□ -1.5
TP20293 Gm29551-201ENSMUST00000190913 698 ntBASIC5.65□□□□□ -1.5
TP20293 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.65□□□□□ -1.5
TP20293 Gm2142-201ENSMUST00000197899 589 ntBASIC5.65□□□□□ -1.5
TP20293 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.65□□□□□ -1.5
TP20293 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Gm4587-201ENSMUST00000209135 637 ntBASIC5.65□□□□□ -1.5
TP20293 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.65□□□□□ -1.5
TP20293 Gm3266-201ENSMUST00000217832 591 ntBASIC5.65□□□□□ -1.5
TP20293 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TP20293 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TP20293 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TP20293 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.65□□□□□ -1.5
TP20293 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TP20293 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TP20293 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.65□□□□□ -1.51
TP20293 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.65□□□□□ -1.51
TP20293 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.65□□□□□ -1.51
TP20293 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.65□□□□□ -1.51
TP20293 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.65□□□□□ -1.51
TP20293 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.65□□□□□ -1.51
TP20293 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TP20293 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.64□□□□□ -1.51
TP20293 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TP20293 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TP20293 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TP20293 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TP20293 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TP20293 Gm26144-201ENSMUST00000104475 132 ntBASIC5.64□□□□□ -1.51
TP20293 Gm12643-201ENSMUST00000116078 374 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms