Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm9597-201ENSMUST00000171913 602 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm28973-201ENSMUST00000189310 613 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm37341-201ENSMUST00000194680 371 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm5990-201ENSMUST00000203126 746 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm25133-201ENSMUST00000082647 130 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm13770-201ENSMUST00000117149 305 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm12193-201ENSMUST00000117250 379 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm14529-201ENSMUST00000117894 406 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm13493-201ENSMUST00000120318 493 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm11852-201ENSMUST00000120806 222 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm24383-201ENSMUST00000122691 333 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm4660-201ENSMUST00000131499 403 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm24687-201ENSMUST00000157758 241 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Vis1-201ENSMUST00000183957 201 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm6693-201ENSMUST00000189583 813 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm18789-201ENSMUST00000216115 550 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm22126-201ENSMUST00000083244 142 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm25515-201ENSMUST00000083858 157 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Chmp6P0C0A3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm9836-201ENSMUST00000117132 216 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm13428-201ENSMUST00000117540 365 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm26106-201ENSMUST00000157254 228 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm25660-201ENSMUST00000158470 104 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm24741-201ENSMUST00000158857 106 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm15970-201ENSMUST00000160623 834 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Gm21399-201ENSMUST00000180210 597 ntBASIC6.34□□□□□ -1.39
Chmp6P0C0A3 Mir6952-201ENSMUST00000185092 61 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms