Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Mir8095-201ENSMUST00000185103 129 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm6610-201ENSMUST00000186324 358 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm37392-201ENSMUST00000192098 516 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm8925-201ENSMUST00000197212 763 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm44041-201ENSMUST00000203678 396 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm4259-201ENSMUST00000206489 758 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm38388-201ENSMUST00000195569 1430 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm38099-201ENSMUST00000193280 3170 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm9776-201ENSMUST00000059598 2980 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14594-201ENSMUST00000118052 537 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm15333-201ENSMUST00000118825 364 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14590-201ENSMUST00000118934 537 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14679-201ENSMUST00000121536 722 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm12095-201ENSMUST00000121962 816 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm16254-201ENSMUST00000131528 730 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm23030-201ENSMUST00000158004 273 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm25437-201ENSMUST00000158282 132 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Trbv10-201ENSMUST00000168322 289 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm7991-201ENSMUST00000168668 591 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm26455-201ENSMUST00000175300 92 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14596-201ENSMUST00000180268 537 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm14595-201ENSMUST00000180335 537 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm27998-201ENSMUST00000184902 361 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm28996-201ENSMUST00000190316 721 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm37481-201ENSMUST00000195176 403 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm42932-201ENSMUST00000197280 744 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxd3P09027 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms