Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Zfp389-201ENSMUST00000118425 675 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm13772-201ENSMUST00000118431 317 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm7700-201ENSMUST00000120273 970 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm15696-201ENSMUST00000121730 445 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm24435-201ENSMUST00000157886 110 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm29519-201ENSMUST00000186994 398 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm18799-201ENSMUST00000189104 913 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm28996-201ENSMUST00000190316 721 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm37758-201ENSMUST00000194275 629 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm9292-201ENSMUST00000222008 710 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm2614-201ENSMUST00000223227 403 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm8256-203ENSMUST00000228692 591 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm22371-201ENSMUST00000104588 130 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm13114-201ENSMUST00000117605 106 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm4234-201ENSMUST00000119747 714 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm14998-201ENSMUST00000120502 495 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm17366-201ENSMUST00000167629 187 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AV026068-216ENSMUST00000223874 328 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms