Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm9836-201ENSMUST00000117132 216 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm13811-201ENSMUST00000117800 256 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm14485-201ENSMUST00000119489 493 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm14294-201ENSMUST00000119749 751 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm11852-201ENSMUST00000120806 222 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm11848-201ENSMUST00000121207 973 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm24719-201ENSMUST00000157520 110 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm25013-201ENSMUST00000158402 128 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm17121-201ENSMUST00000170414 847 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm19560-201ENSMUST00000177510 514 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm17222-201ENSMUST00000180135 847 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm2539-203ENSMUST00000181352 746 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Mir6952-201ENSMUST00000185092 61 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm10688-201ENSMUST00000214985 520 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm9237-201ENSMUST00000221499 548 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdc40Q9DC48 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Mir700-201ENSMUST00000102169 79 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm10936-201ENSMUST00000105264 252 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm14529-201ENSMUST00000117894 406 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm14805-201ENSMUST00000120172 340 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm15786-201ENSMUST00000121079 450 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm23030-201ENSMUST00000158004 273 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm22210-201ENSMUST00000158101 144 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm27854-201ENSMUST00000175578 244 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm27960-201ENSMUST00000183445 184 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm28973-201ENSMUST00000189310 613 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm43382-201ENSMUST00000198954 838 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm7832-201ENSMUST00000202613 880 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm31861-201ENSMUST00000204563 672 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm17994-201ENSMUST00000209260 533 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Gm6009-201ENSMUST00000210848 280 ntBASIC5.53□□□□□ -1.52
Cdc40Q9DC48 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms