Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm24767-201ENSMUST00000158509 95 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm22698-201ENSMUST00000175375 108 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm21839-201ENSMUST00000179536 378 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm8930-201ENSMUST00000201693 768 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm44108-201ENSMUST00000203525 422 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm6702-201ENSMUST00000208496 471 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm9292-201ENSMUST00000222008 710 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm8412-201ENSMUST00000077493 440 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm24029-201ENSMUST00000083928 143 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm9506-201ENSMUST00000118516 320 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm14018-201ENSMUST00000119042 455 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm7494-201ENSMUST00000121248 441 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm12396-201ENSMUST00000121600 306 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm15164-201ENSMUST00000122203 271 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm26923-201ENSMUST00000182615 996 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm28080-201ENSMUST00000188552 722 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm21524-201ENSMUST00000190499 696 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm21715-201ENSMUST00000191056 694 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm44163-201ENSMUST00000205140 475 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm45082-201ENSMUST00000206082 601 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.53□□□□□ -1.52
Use1Q9CQ56 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Use1Q9CQ56 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Use1Q9CQ56 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms