Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm18940-201ENSMUST00000222518 871 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 Gm2614-201ENSMUST00000223227 403 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp11Q99K46 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp11Q99K46 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Usp11Q99K46 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp11Q99K46 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.24□□□□□ -1.41
Usp11Q99K46 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm25564-201ENSMUST00000104604 132 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm13835-201ENSMUST00000118459 685 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm11617-201ENSMUST00000119609 639 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm6446-201ENSMUST00000120604 818 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm15300-201ENSMUST00000122324 279 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm21542-201ENSMUST00000182307 993 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm3351-201ENSMUST00000193454 505 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp11Q99K46 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm32158-201ENSMUST00000200135 404 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm44603-201ENSMUST00000206820 367 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm8256-203ENSMUST00000228692 591 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp11Q99K46 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp11Q99K46 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp11Q99K46 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.23□□□□□ -1.41
Usp11Q99K46 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp11Q99K46 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp11Q99K46 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp11Q99K46 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp11Q99K46 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp11Q99K46 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Usp11Q99K46 Mir290a-201ENSMUST00000104627 83 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm7700-201ENSMUST00000120273 970 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm12890-201ENSMUST00000120885 373 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm14776-201ENSMUST00000121029 887 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm23553-201ENSMUST00000157817 295 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm27512-201ENSMUST00000175328 126 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm29519-201ENSMUST00000186994 398 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm28080-201ENSMUST00000188552 722 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm21524-201ENSMUST00000190499 696 ntBASIC6.22□□□□□ -1.41
Usp11Q99K46 Gm21715-201ENSMUST00000191056 694 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms