Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm24179-201ENSMUST00000158925 127 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm9671-201ENSMUST00000171502 547 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm8183-201ENSMUST00000183134 980 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Mir6362-201ENSMUST00000184329 107 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm28934-201ENSMUST00000186491 346 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm37966-201ENSMUST00000193122 326 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm37720-201ENSMUST00000195497 1241 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm18689-201ENSMUST00000203969 902 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm24029-201ENSMUST00000083928 143 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rpap2Q8VC34 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm24434-201ENSMUST00000104081 132 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm13531-201ENSMUST00000121893 543 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm15840-201ENSMUST00000122099 943 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm26211-201ENSMUST00000158578 129 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm4845-201ENSMUST00000179202 562 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm21399-201ENSMUST00000180210 597 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm28527-201ENSMUST00000185210 297 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm37196-201ENSMUST00000194762 906 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm43390-201ENSMUST00000196614 421 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm44494-201ENSMUST00000196760 129 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm43467-201ENSMUST00000197441 437 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.55□□□□□ -1.36
Rpap2Q8VC34 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rpap2Q8VC34 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rpap2Q8VC34 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Rpap2Q8VC34 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rpap2Q8VC34 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms