Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm23082-201ENSMUST00000157852 133 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm23633-201ENSMUST00000175293 119 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm29072-201ENSMUST00000191149 678 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm6631-201ENSMUST00000193699 559 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm43478-201ENSMUST00000200381 292 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm44312-201ENSMUST00000203536 469 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm7802-201ENSMUST00000216464 262 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm33312-201ENSMUST00000222443 332 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Brf1Q8CFK2 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm25317-201ENSMUST00000116824 129 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm13770-201ENSMUST00000117149 305 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm4234-201ENSMUST00000119747 714 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm6067-201ENSMUST00000121648 491 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm13531-201ENSMUST00000121893 543 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm15187-201ENSMUST00000122329 264 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm23896-201ENSMUST00000158109 130 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm23897-201ENSMUST00000158110 158 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm7952-201ENSMUST00000180540 984 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Mir7669-201ENSMUST00000183442 58 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm33571-201ENSMUST00000193271 657 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm18445-201ENSMUST00000195502 774 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 AC153544.1-201ENSMUST00000217988 400 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Brf1Q8CFK2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.21□□□□□ -1.25
Brf1Q8CFK2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Brf1Q8CFK2 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.21□□□□□ -1.25
Brf1Q8CFK2 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.21□□□□□ -1.25
Brf1Q8CFK2 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm24709-201ENSMUST00000104123 132 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms