Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18427-201ENSMUST00000195422 515 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm25617-202ENSMUST00000198387 132 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm42696-201ENSMUST00000199859 1142 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm24029-201ENSMUST00000083928 143 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm7927-201ENSMUST00000118818 880 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm7058-201ENSMUST00000119209 902 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm11227-201ENSMUST00000119774 471 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm7599-201ENSMUST00000121453 796 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12451-201ENSMUST00000121636 633 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm23279-201ENSMUST00000157912 97 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8582-201ENSMUST00000164061 789 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm23617-201ENSMUST00000175410 95 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm24949-201ENSMUST00000183609 215 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18407-201ENSMUST00000192126 790 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37526-201ENSMUST00000194640 619 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43779-201ENSMUST00000196691 829 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43354-201ENSMUST00000196862 346 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm7554-201ENSMUST00000202282 574 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm2398-201ENSMUST00000218347 883 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms