Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm25917-201ENSMUST00000104267 130 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm11902-201ENSMUST00000118849 270 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm15660-201ENSMUST00000118997 478 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Mir1900-201ENSMUST00000122714 78 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm23896-201ENSMUST00000158109 130 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm9597-201ENSMUST00000171913 602 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm29489-201ENSMUST00000188934 324 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm42961-201ENSMUST00000202023 181 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm43105-201ENSMUST00000202987 459 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm44768-201ENSMUST00000205719 393 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm18591-201ENSMUST00000220568 763 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm20486-201ENSMUST00000101544 128 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Mirt2-201ENSMUST00000175179 285 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Mir6361-201ENSMUST00000185079 101 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm43928-201ENSMUST00000203737 409 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm19900-201ENSMUST00000207285 576 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm45628-201ENSMUST00000210849 274 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm45850-201ENSMUST00000212536 338 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trub1Q8C0D0 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.98□□□□□ -1.45
Trub1Q8C0D0 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm24709-201ENSMUST00000104123 132 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm12193-201ENSMUST00000117250 379 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm23995-201ENSMUST00000158060 129 ntBASIC5.97□□□□□ -1.45
Trub1Q8C0D0 Gm23149-201ENSMUST00000158837 230 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms