Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25227-201ENSMUST00000158204 112 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm1972-201ENSMUST00000181606 964 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm29736-201ENSMUST00000198189 385 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm43743-202ENSMUST00000198353 491 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm43456-201ENSMUST00000202519 457 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 AC124420.1-201ENSMUST00000219779 791 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Usp47Q8BY87 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.21□□□□□ -1.09
Usp47Q8BY87 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp47Q8BY87 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm15400-201ENSMUST00000118944 601 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm13245-201ENSMUST00000119646 260 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm13991-201ENSMUST00000120190 648 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm25152-201ENSMUST00000157117 114 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm8920-201ENSMUST00000196153 924 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm7990-201ENSMUST00000212126 593 ntBASIC8.21□□□□□ -1.1
Usp47Q8BY87 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Usp47Q8BY87 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp47Q8BY87 CT025686.2-201ENSMUST00000227898 3315 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp47Q8BY87 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm15187-201ENSMUST00000122329 264 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm23279-201ENSMUST00000157912 97 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm9006-201ENSMUST00000165520 841 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm27887-201ENSMUST00000184367 102 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Ighv5-19-201ENSMUST00000193466 297 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm9480-201ENSMUST00000198038 616 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gm45249-201ENSMUST00000211021 348 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 LOC665443-201ENSMUST00000212284 796 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp47Q8BY87 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp47Q8BY87 AL670757.1-201ENSMUST00000223668 1959 ntBASIC8.2□□□□□ -1.1
Usp47Q8BY87 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp47Q8BY87 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp47Q8BY87 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Ear-ps2-201ENSMUST00000100689 466 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm22499-201ENSMUST00000104501 135 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm14335-201ENSMUST00000119165 810 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm12322-201ENSMUST00000121605 389 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm22529-201ENSMUST00000158817 123 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm22993-201ENSMUST00000175423 254 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 Gm3605-201ENSMUST00000185858 440 ntBASIC8.19□□□□□ -1.1
Usp47Q8BY87 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms