Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm13176-201ENSMUST00000117910 477 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm13771-201ENSMUST00000117988 238 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm14531-201ENSMUST00000120845 285 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm8722-201ENSMUST00000121466 769 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm15152-201ENSMUST00000121540 394 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm12438-201ENSMUST00000122034 336 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Mir1960-201ENSMUST00000157488 78 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm22852-201ENSMUST00000177899 101 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm37265-201ENSMUST00000191698 885 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm4332-201ENSMUST00000196114 346 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm43849-201ENSMUST00000201086 215 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm8863-201ENSMUST00000216630 926 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm19212-201ENSMUST00000216642 862 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm9237-201ENSMUST00000221499 548 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.26□□□□□ -1.41
Ccdc40Q8BI79 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm12653-201ENSMUST00000117778 561 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm13493-201ENSMUST00000120318 493 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm14349-201ENSMUST00000137155 902 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm24186-201ENSMUST00000157983 127 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm24682-201ENSMUST00000158764 137 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm8367-201ENSMUST00000186145 887 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm5260-201ENSMUST00000186157 949 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm29111-201ENSMUST00000188823 696 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm29551-201ENSMUST00000190913 698 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm28584-201ENSMUST00000191489 696 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm38138-201ENSMUST00000193274 696 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm37991-201ENSMUST00000194297 696 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm43048-201ENSMUST00000196101 388 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm7492-201ENSMUST00000201745 725 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm29781-201ENSMUST00000203862 478 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm2614-201ENSMUST00000223227 403 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm24032-201ENSMUST00000083932 159 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc40Q8BI79 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc40Q8BI79 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms