Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm4263-202ENSMUST00000221392 667 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm6990-201ENSMUST00000086830 348 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC122357.1-201ENSMUST00000221652 1515 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Klf5-202ENSMUST00000226784 2852 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm11821-201ENSMUST00000117335 979 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm13176-201ENSMUST00000117910 477 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm12230-201ENSMUST00000118301 454 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm15385-201ENSMUST00000118725 667 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm12044-201ENSMUST00000120335 213 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm12593-201ENSMUST00000120981 743 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm14990-201ENSMUST00000122354 445 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm4997-201ENSMUST00000154056 360 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm24395-201ENSMUST00000158139 125 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm7346-201ENSMUST00000169661 476 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm23186-201ENSMUST00000180078 107 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm27266-201ENSMUST00000184521 123 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm18406-201ENSMUST00000185872 669 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm37946-201ENSMUST00000192064 347 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm43431-201ENSMUST00000198577 340 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm18781-201ENSMUST00000211252 924 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm18040-201ENSMUST00000217922 827 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AC131085.1-201ENSMUST00000224746 656 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Prpf38bQ80SY5 Gm22351-201ENSMUST00000083925 107 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms