Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC165349.1-201ENSMUST00000217896 424 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm36758-201ENSMUST00000222594 310 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 AV026068-218ENSMUST00000223980 575 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 AC156016.2-201ENSMUST00000228200 525 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm42490-201ENSMUST00000198595 2064 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm24272-201ENSMUST00000102329 98 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Mir193b-201ENSMUST00000103784 79 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm24519-201ENSMUST00000104507 132 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm12007-201ENSMUST00000120978 597 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm23435-201ENSMUST00000157183 156 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm8358-201ENSMUST00000167222 555 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm28739-201ENSMUST00000185415 696 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm29259-201ENSMUST00000186396 694 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm28949-201ENSMUST00000187805 696 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm28483-201ENSMUST00000189519 696 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm37313-201ENSMUST00000191673 290 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm38022-201ENSMUST00000191762 403 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm32347-201ENSMUST00000192944 696 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm19185-201ENSMUST00000196365 643 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm17906-201ENSMUST00000202480 901 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 AC162376.1-201ENSMUST00000220120 435 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm9269-201ENSMUST00000221661 578 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 CT009515.3-201ENSMUST00000226509 671 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim41Q5NCC3 Gm11242-201ENSMUST00000120103 2457 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm18716-201ENSMUST00000204507 1603 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm13672-201ENSMUST00000117554 459 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm22199-201ENSMUST00000122660 126 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm24628-201ENSMUST00000122761 289 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm23591-201ENSMUST00000157663 286 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm27036-201ENSMUST00000182465 980 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm21803-201ENSMUST00000188897 693 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm28567-201ENSMUST00000190270 693 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm37044-201ENSMUST00000193531 693 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm38369-201ENSMUST00000195101 693 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Ighv1-44-201ENSMUST00000195597 352 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm45427-201ENSMUST00000209572 1253 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm45514-201ENSMUST00000211531 689 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 AC073947.3-201ENSMUST00000215576 766 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim41Q5NCC3 Gm2139-201ENSMUST00000222569 1075 ntBASIC12.4□□□□□ -0.42
Trim41Q5NCC3 AC121997.2-202ENSMUST00000227158 939 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms