Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm38185-201ENSMUST00000193195 694 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm37177-201ENSMUST00000193768 417 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm37196-201ENSMUST00000194762 906 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AV026068-220ENSMUST00000224153 1147 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm23624-201ENSMUST00000082463 321 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim43aQ3TL54 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.24□□□□□ -1.41
Trim43aQ3TL54 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm13770-201ENSMUST00000117149 305 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm14267-201ENSMUST00000119751 496 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm9005-201ENSMUST00000119908 607 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm12307-201ENSMUST00000120581 590 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm2602-201ENSMUST00000202112 571 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm45082-201ENSMUST00000206082 601 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm45448-201ENSMUST00000211739 209 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.23□□□□□ -1.41
Trim43aQ3TL54 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim43aQ3TL54 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm11271-201ENSMUST00000116054 440 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm14772-201ENSMUST00000116562 514 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm13311-201ENSMUST00000117863 379 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm12833-201ENSMUST00000136112 477 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm25219-201ENSMUST00000157545 330 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm17511-201ENSMUST00000172206 342 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms