Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm11826-201ENSMUST00000118781 438 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm25865-201ENSMUST00000158247 104 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm38053-201ENSMUST00000193938 160 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 AC165953.1-201ENSMUST00000226386 357 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm38377-201ENSMUST00000193253 3772 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm7079-201ENSMUST00000119726 171 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm26595-201ENSMUST00000181585 484 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC3.89□□□□□ -1.79
PrkdcP97313 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm23193-201ENSMUST00000102427 82 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm15796-201ENSMUST00000162135 204 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm42542-201ENSMUST00000197978 268 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm44108-201ENSMUST00000203525 422 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC3.89□□□□□ -1.79
PrkdcP97313 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm18541-201ENSMUST00000215935 538 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm23796-201ENSMUST00000084011 160 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 AC159195.2-201ENSMUST00000223670 3757 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm19552-201ENSMUST00000194744 2833 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 AC132852.1-201ENSMUST00000214683 2324 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm37367-201ENSMUST00000191771 2602 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm22899-201ENSMUST00000104540 131 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm9308-201ENSMUST00000119073 448 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm12732-201ENSMUST00000121688 180 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm13149-201ENSMUST00000122071 339 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm26034-201ENSMUST00000158154 116 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.88□□□□□ -1.79
PrkdcP97313 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm17847-201ENSMUST00000188261 1127 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm9173-201ENSMUST00000198054 400 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm45700-201ENSMUST00000205866 347 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm6906-201ENSMUST00000218014 569 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr654-201ENSMUST00000098173 1155 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms