Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Gm6543-201ENSMUST00000197353 808 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC8.98□□□□□ -0.97
Cux1P53564 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.98□□□□□ -0.97
Cux1P53564 Mir449a-201ENSMUST00000083641 91 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cux1P53564 Gm42541-201ENSMUST00000199871 2249 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cux1P53564 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cux1P53564 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.98□□□□□ -0.97
Cux1P53564 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Cux1P53564 Gm18853-201ENSMUST00000183629 3596 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cux1P53564 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cux1P53564 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cux1P53564 Gm12267-201ENSMUST00000121609 761 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm12685-201ENSMUST00000121702 214 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm23806-201ENSMUST00000175157 109 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Mir6539-201ENSMUST00000183732 110 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm37716-201ENSMUST00000193553 947 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm44330-201ENSMUST00000200106 143 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC8.97□□□□□ -0.97
Cux1P53564 Thoc7-209ENSMUST00000225325 765 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Cux1P53564 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Cux1P53564 Gm37926-201ENSMUST00000191922 2424 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.97□□□□□ -0.97
Cux1P53564 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Cux1P53564 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cux1P53564 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Gm44440-201ENSMUST00000203139 2373 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Cux1P53564 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm4234-201ENSMUST00000119747 714 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm13488-201ENSMUST00000120419 179 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Gm25962-201ENSMUST00000157173 168 ntBASIC8.96□□□□□ -0.97
Cux1P53564 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Gm18117-201ENSMUST00000187720 742 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm2429-201ENSMUST00000194635 586 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm4874-201ENSMUST00000203589 691 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm6702-201ENSMUST00000208496 471 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm7990-201ENSMUST00000212126 593 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cux1P53564 AL807824.1-201ENSMUST00000223151 183 ntBASIC8.96□□□□□ -0.97
Cux1P53564 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cux1P53564 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Cux1P53564 Mir194-1-201ENSMUST00000083647 67 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Cux1P53564 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cux1P53564 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cux1P53564 Gm45172-201ENSMUST00000206054 1301 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Cux1P53564 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cux1P53564 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.96□□□□□ -0.97
Cux1P53564 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC8.96□□□□□ -0.97
Cux1P53564 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC8.96□□□□□ -0.98
Cux1P53564 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cux1P53564 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cux1P53564 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Cux1P53564 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
Cux1P53564 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC8.96□□□□□ -0.98
Cux1P53564 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cux1P53564 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cux1P53564 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cux1P53564 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm12094-201ENSMUST00000121781 472 ntBASIC8.95□□□□□ -0.98
Cux1P53564 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC8.95□□□□□ -0.98
Cux1P53564 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 Gm2950-201ENSMUST00000185530 520 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 Gm37773-201ENSMUST00000194141 2120 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm45525-201ENSMUST00000210800 389 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cux1P53564 AC134537.2-201ENSMUST00000217770 575 ntBASIC8.95□□□□□ -0.98
Cux1P53564 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Gm40692-201ENSMUST00000220411 491 ntBASIC8.95□□□□□ -0.98
Cux1P53564 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cux1P53564 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cux1P53564 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms