Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 AC162467.1-201ENSMUST00000220254 621 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 AC123062.1-201ENSMUST00000221287 481 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm7045-201ENSMUST00000221466 605 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rfx1P48377 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rfx1P48377 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rfx1P48377 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC7.89□□□□□ -1.15
Rfx1P48377 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm22781-201ENSMUST00000104083 137 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm26016-201ENSMUST00000104403 129 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm14513-201ENSMUST00000117403 123 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm12229-201ENSMUST00000120487 468 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm24444-201ENSMUST00000157244 308 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm23079-201ENSMUST00000157847 117 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Mir1930-201ENSMUST00000158799 84 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Mir3072-201ENSMUST00000175610 83 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm17786-201ENSMUST00000182000 427 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm29184-201ENSMUST00000190038 334 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm17820-201ENSMUST00000220213 1068 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm18618-201ENSMUST00000222211 473 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm5341-201ENSMUST00000058881 489 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Gm7204-201ENSMUST00000062591 600 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm42701-201ENSMUST00000196117 1657 ntBASIC7.88□□□□□ -1.15
Rfx1P48377 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.88□□□□□ -1.15
Rfx1P48377 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.88□□□□□ -1.15
Rfx1P48377 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rfx1P48377 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Rfx1P48377 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Rfx1P48377 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Mir804-201ENSMUST00000103251 95 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm12643-201ENSMUST00000116078 374 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm12598-201ENSMUST00000117333 830 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm13484-201ENSMUST00000120738 412 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm25969-201ENSMUST00000157166 132 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm26025-201ENSMUST00000158655 271 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Gm24756-201ENSMUST00000177002 96 ntBASIC7.87□□□□□ -1.15
Rfx1P48377 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Rfx1P48377 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Rfx1P48377 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.87□□□□□ -1.15
Rfx1P48377 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Rfx1P48377 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Rfx1P48377 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms