Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm25795-201ENSMUST00000104421 132 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Snora35-201ENSMUST00000104579 128 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 Gm13702-201ENSMUST00000118542 825 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm14098-201ENSMUST00000119295 623 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm14375-201ENSMUST00000119490 855 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.53□□□□□ -1.52
Sox6P40645 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm25219-201ENSMUST00000157545 330 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm23553-201ENSMUST00000157817 295 ntBASIC5.53□□□□□ -1.52
Sox6P40645 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm17934-201ENSMUST00000192818 422 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 Gm43233-201ENSMUST00000200491 616 ntBASIC5.53□□□□□ -1.52
Sox6P40645 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.53□□□□□ -1.52
Sox6P40645 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox6P40645 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox6P40645 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.53□□□□□ -1.52
Sox6P40645 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.53□□□□□ -1.52
Sox6P40645 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Sox6P40645 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Sox6P40645 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.52□□□□□ -1.53
Sox6P40645 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox6P40645 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm23311-201ENSMUST00000104152 134 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm11893-201ENSMUST00000117829 491 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm11341-201ENSMUST00000122316 447 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Mir1900-201ENSMUST00000122714 78 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm6541-201ENSMUST00000165542 561 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm20614-201ENSMUST00000177106 632 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm26923-201ENSMUST00000182615 996 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm27998-201ENSMUST00000184902 361 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Sox6P40645 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Gm29111-201ENSMUST00000188823 696 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm28584-201ENSMUST00000191489 696 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm38138-201ENSMUST00000193274 696 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm37191-201ENSMUST00000193346 388 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm37991-201ENSMUST00000194297 696 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm29736-201ENSMUST00000198189 385 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm44108-201ENSMUST00000203525 422 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm4032-201ENSMUST00000210886 487 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm18255-201ENSMUST00000211316 765 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm8863-201ENSMUST00000216630 926 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.52□□□□□ -1.53
Sox6P40645 Gm10095-201ENSMUST00000222765 483 ntBASIC5.52□□□□□ -1.53
Sox6P40645 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.52□□□□□ -1.53
Sox6P40645 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.52□□□□□ -1.53
Sox6P40645 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Sox6P40645 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox6P40645 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox6P40645 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox6P40645 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.51□□□□□ -1.53
Sox6P40645 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms