Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.68□□□□□ -1.5
TP20293 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.68□□□□□ -1.5
TP20293 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.68□□□□□ -1.5
TP20293 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.68□□□□□ -1.5
TP20293 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.68□□□□□ -1.5
TP20293 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.68□□□□□ -1.5
TP20293 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Gm22351-201ENSMUST00000083925 107 ntBASIC5.68□□□□□ -1.5
TP20293 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.68□□□□□ -1.5
TP20293 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.68□□□□□ -1.5
TP20293 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TP20293 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TP20293 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.68□□□□□ -1.5
TP20293 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.68□□□□□ -1.5
TP20293 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.68□□□□□ -1.5
TP20293 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TP20293 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.68□□□□□ -1.5
TP20293 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TP20293 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.67□□□□□ -1.5
TP20293 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TP20293 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.67□□□□□ -1.5
TP20293 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm2199-201ENSMUST00000119065 874 ntBASIC5.67□□□□□ -1.5
TP20293 Gm14331-201ENSMUST00000120396 409 ntBASIC5.67□□□□□ -1.5
TP20293 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.67□□□□□ -1.5
TP20293 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.67□□□□□ -1.5
TP20293 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.67□□□□□ -1.5
TP20293 Gm17121-201ENSMUST00000170414 847 ntBASIC5.67□□□□□ -1.5
TP20293 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.67□□□□□ -1.5
TP20293 Gm17222-201ENSMUST00000180135 847 ntBASIC5.67□□□□□ -1.5
TP20293 Gm27998-201ENSMUST00000184902 361 ntBASIC5.67□□□□□ -1.5
TP20293 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TP20293 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm28507-201ENSMUST00000189737 703 ntBASIC5.67□□□□□ -1.5
TP20293 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm37838-201ENSMUST00000194464 312 ntBASIC5.67□□□□□ -1.5
TP20293 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.67□□□□□ -1.5
TP20293 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.67□□□□□ -1.5
TP20293 Gm5318-201ENSMUST00000205249 406 ntBASIC5.67□□□□□ -1.5
TP20293 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.67□□□□□ -1.5
TP20293 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.67□□□□□ -1.5
TP20293 Gm2614-201ENSMUST00000223227 403 ntBASIC5.67□□□□□ -1.5
TP20293 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.67□□□□□ -1.5
TP20293 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.67□□□□□ -1.5
TP20293 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
TP20293 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.67□□□□□ -1.5
TP20293 Gm22581-201ENSMUST00000083735 136 ntBASIC5.67□□□□□ -1.5
TP20293 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.67□□□□□ -1.5
TP20293 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
TP20293 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.67□□□□□ -1.5
TP20293 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.67□□□□□ -1.5
TP20293 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TP20293 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
TP20293 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.66□□□□□ -1.5
TP20293 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TP20293 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.66□□□□□ -1.5
TP20293 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.66□□□□□ -1.5
TP20293 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.66□□□□□ -1.5
TP20293 Snora35-201ENSMUST00000104579 128 ntBASIC5.66□□□□□ -1.5
TP20293 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TP20293 Gm22952-201ENSMUST00000116720 120 ntBASIC5.66□□□□□ -1.5
TP20293 Gm14098-201ENSMUST00000119295 623 ntBASIC5.66□□□□□ -1.5
TP20293 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.66□□□□□ -1.5
TP20293 Gm23954-201ENSMUST00000157213 353 ntBASIC5.66□□□□□ -1.5
TP20293 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.66□□□□□ -1.5
TP20293 Gm22701-201ENSMUST00000175371 291 ntBASIC5.66□□□□□ -1.5
TP20293 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.66□□□□□ -1.5
TP20293 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.66□□□□□ -1.5
TP20293 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TP20293 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms