Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm25342-201ENSMUST00000157459 122 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm9027-201ENSMUST00000165914 661 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm18006-201ENSMUST00000177411 662 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Gm27295-201ENSMUST00000184264 153 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Mir7072-201ENSMUST00000184542 60 ntBASIC5.99□□□□□ -1.45
Lire1P11260 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm42428-201ENSMUST00000198677 302 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Gm45514-201ENSMUST00000211531 689 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm38574-201ENSMUST00000211855 640 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.99□□□□□ -1.45
Lire1P11260 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm4042-201ENSMUST00000216946 637 ntBASIC5.99□□□□□ -1.45
Lire1P11260 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Cma2-202ENSMUST00000228263 857 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lire1P11260 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lire1P11260 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Lire1P11260 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.99□□□□□ -1.45
Lire1P11260 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.98□□□□□ -1.45
Lire1P11260 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm24272-201ENSMUST00000102329 98 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm8424-201ENSMUST00000117716 988 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm11318-201ENSMUST00000118640 961 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm12135-201ENSMUST00000119170 466 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm5793-201ENSMUST00000119393 630 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm14375-201ENSMUST00000119490 855 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.98□□□□□ -1.45
Lire1P11260 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.98□□□□□ -1.45
Lire1P11260 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.98□□□□□ -1.45
Lire1P11260 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm38166-201ENSMUST00000191660 471 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm38122-201ENSMUST00000192679 885 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm37463-201ENSMUST00000193819 796 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm18952-201ENSMUST00000194471 846 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm5694-201ENSMUST00000195648 641 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms