Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm25852-201ENSMUST00000082790 130 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm43686-201ENSMUST00000197351 2439 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hoxd3P09027 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm24462-201ENSMUST00000102430 106 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm6746-201ENSMUST00000108774 483 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm15578-201ENSMUST00000117320 475 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm13243-201ENSMUST00000117481 565 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm13252-201ENSMUST00000119355 321 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm13240-201ENSMUST00000120042 565 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm16179-201ENSMUST00000120685 373 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm11438-201ENSMUST00000121582 189 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm13221-201ENSMUST00000121712 430 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm12967-201ENSMUST00000122147 289 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm20673-201ENSMUST00000177167 430 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm5698-201ENSMUST00000178317 724 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Hoxd3P09027 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms