Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm2199-201ENSMUST00000119065 874 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Apc-ps1-201ENSMUST00000119356 470 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm13438-201ENSMUST00000120100 573 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm15502-201ENSMUST00000121449 208 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Mir6940-201ENSMUST00000183447 70 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Ighv5-19-201ENSMUST00000193466 297 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm37341-201ENSMUST00000194680 371 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm4332-201ENSMUST00000196114 346 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Ass-ps1-201ENSMUST00000197717 761 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm9652-201ENSMUST00000209345 163 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm18103-201ENSMUST00000216621 779 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 AC165349.1-201ENSMUST00000217896 424 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 AC123533.2-201ENSMUST00000228176 375 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmgb3O54879 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Gm4973-201ENSMUST00000206925 1334 ntBASIC4.7□□□□□ -1.66
Hmgb3O54879 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmgb3O54879 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmgb3O54879 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm18908-201ENSMUST00000207125 1483 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm5454-201ENSMUST00000052030 1453 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm25093-201ENSMUST00000103993 132 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm12641-201ENSMUST00000117874 985 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm5793-201ENSMUST00000119393 630 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Calr-ps-201ENSMUST00000121776 485 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm10157-201ENSMUST00000139408 343 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm5871-201ENSMUST00000176461 718 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm22852-201ENSMUST00000177899 101 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm25617-201ENSMUST00000179548 133 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm9556-201ENSMUST00000182938 940 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm28149-201ENSMUST00000187102 378 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm28768-201ENSMUST00000189034 378 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm28455-201ENSMUST00000189105 1290 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms