Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Mir1963-201ENSMUST00000158594 59 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm38040-201ENSMUST00000193505 225 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm22420-201ENSMUST00000178795 126 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm28017-201ENSMUST00000183434 126 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm29376-201ENSMUST00000189357 835 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm7733-201ENSMUST00000199038 919 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm43436-201ENSMUST00000199308 147 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm9278-201ENSMUST00000205508 553 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm4032-201ENSMUST00000210886 487 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm14871-201ENSMUST00000119056 194 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm11197-201ENSMUST00000145158 839 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm27193-201ENSMUST00000184217 586 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm44132-201ENSMUST00000205142 151 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm46192-201ENSMUST00000217894 326 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.48□□□□□ -1.37
Scn3aA2ASI5 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm14512-201ENSMUST00000117924 230 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm15741-201ENSMUST00000119401 754 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm7079-201ENSMUST00000119726 171 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm27985-201ENSMUST00000185112 378 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm18348-201ENSMUST00000191227 820 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm37336-202ENSMUST00000193705 468 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm6702-201ENSMUST00000208496 471 ntBASIC6.47□□□□□ -1.37
Scn3aA2ASI5 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scn3aA2ASI5 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms