Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm37784-201ENSMUST00000193233 189 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm37463-201ENSMUST00000193819 796 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Cma2-202ENSMUST00000228263 857 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm22300-201ENSMUST00000082661 126 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm22952-201ENSMUST00000116720 120 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm14382-201ENSMUST00000117374 437 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm15332-201ENSMUST00000118386 357 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm23896-201ENSMUST00000158109 130 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm6541-201ENSMUST00000165542 561 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm20778-201ENSMUST00000178524 627 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm29111-201ENSMUST00000188823 696 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm28584-201ENSMUST00000191489 696 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm38138-201ENSMUST00000193274 696 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm37375-201ENSMUST00000193859 387 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm37991-201ENSMUST00000194297 696 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm37385-201ENSMUST00000195223 387 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm32158-201ENSMUST00000200135 404 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm43798-201ENSMUST00000202056 394 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 AC159246.1-201ENSMUST00000214478 249 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Gm7570-201ENSMUST00000215246 698 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim3Q9R1R2 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.63□□□□□ -1.51
Trim3Q9R1R2 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.62□□□□□ -1.51
Trim3Q9R1R2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim3Q9R1R2 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms