Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Ube3bQ9ES34 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm7739-201ENSMUST00000221131 1560 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm14729-201ENSMUST00000118373 689 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm15007-201ENSMUST00000119982 710 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm11533-201ENSMUST00000120287 477 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm13121-201ENSMUST00000120637 632 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm9613-201ENSMUST00000171662 196 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm21839-201ENSMUST00000179536 378 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm44300-201ENSMUST00000196792 121 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Ighv1-68-201ENSMUST00000198789 294 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm42824-201ENSMUST00000199361 247 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm43345-201ENSMUST00000199484 269 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm43203-201ENSMUST00000200130 558 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm44048-201ENSMUST00000204531 361 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm4585-201ENSMUST00000207218 452 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm18672-201ENSMUST00000208035 270 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm18940-201ENSMUST00000222518 871 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ube3bQ9ES34 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm11708-201ENSMUST00000119530 832 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm11370-201ENSMUST00000120583 260 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm13162-201ENSMUST00000121481 454 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm8121-201ENSMUST00000153583 499 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm6058-201ENSMUST00000154261 399 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Ear-ps3-201ENSMUST00000168308 445 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm4956-202ENSMUST00000178869 672 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm43546-201ENSMUST00000196721 943 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 Gm43576-201ENSMUST00000197937 871 ntBASIC8.43□□□□□ -1.06
Ube3bQ9ES34 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms