Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm29464-201ENSMUST00000187692 513 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm28080-201ENSMUST00000188552 722 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm28973-201ENSMUST00000189310 613 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm21524-201ENSMUST00000190499 696 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm21715-201ENSMUST00000191056 694 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm43243-201ENSMUST00000199964 278 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 AW046200-203ENSMUST00000211787 2479 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm12713-201ENSMUST00000118404 764 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm11447-201ENSMUST00000118983 858 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm13493-201ENSMUST00000120318 493 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm15596-201ENSMUST00000121139 784 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm27348-201ENSMUST00000184511 170 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm43772-201ENSMUST00000202052 379 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm44538-201ENSMUST00000205615 348 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm19186-201ENSMUST00000219922 333 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm6104-201ENSMUST00000078030 603 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lima1Q9ERG0 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Snora35-201ENSMUST00000104579 128 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm22428-201ENSMUST00000158554 132 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm20480-201ENSMUST00000173953 250 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm26970-201ENSMUST00000182990 964 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm5050-201ENSMUST00000197164 775 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms