Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm14382-201ENSMUST00000117374 437 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm14733-201ENSMUST00000117680 133 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm13532-201ENSMUST00000120373 240 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm12444-201ENSMUST00000121512 877 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm23587-201ENSMUST00000157658 84 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm24680-201ENSMUST00000158759 126 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm2959-201ENSMUST00000169844 621 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm27156-201ENSMUST00000184589 754 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm37770-201ENSMUST00000192855 772 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm18445-201ENSMUST00000195502 774 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm44282-201ENSMUST00000203199 190 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm32899-201ENSMUST00000219694 207 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm9321-201ENSMUST00000221179 778 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 AC154747.1-201ENSMUST00000225265 239 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rnft1Q9DCN7 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rnft1Q9DCN7 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms