Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14349-201ENSMUST00000137155 902 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Mir7685-201ENSMUST00000183555 62 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Mir7211-201ENSMUST00000184071 63 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Mir7674-201ENSMUST00000184964 63 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm29111-201ENSMUST00000188823 696 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm28584-201ENSMUST00000191489 696 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm37265-201ENSMUST00000191698 885 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm38138-201ENSMUST00000193274 696 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm37991-201ENSMUST00000194297 696 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm31211-201ENSMUST00000199170 253 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm44251-201ENSMUST00000204963 442 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm11893-201ENSMUST00000117829 491 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm13493-201ENSMUST00000120318 493 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm14331-201ENSMUST00000120396 409 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm25433-201ENSMUST00000158283 286 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm26169-201ENSMUST00000158420 135 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm23050-201ENSMUST00000158775 165 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm16112-201ENSMUST00000159075 382 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm9597-201ENSMUST00000171913 602 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm26057-201ENSMUST00000178099 165 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm24465-201ENSMUST00000178398 107 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm26595-201ENSMUST00000181585 484 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm8367-201ENSMUST00000186145 887 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm29551-201ENSMUST00000190913 698 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm42886-201ENSMUST00000199214 466 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm43105-201ENSMUST00000202987 459 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm45724-201ENSMUST00000213031 420 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 Gm2614-201ENSMUST00000223227 403 ntBASIC5.55□□□□□ -1.52
Cdc40Q9DC48 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms