Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm13626-201ENSMUST00000119435 402 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm6620-201ENSMUST00000120113 715 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Mir3097-201ENSMUST00000175356 67 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Mir6367-201ENSMUST00000183385 102 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm20561-201ENSMUST00000188131 292 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm4332-201ENSMUST00000196114 346 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Mir298-201ENSMUST00000083476 82 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Smc1aQ9CU62 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.71□□□□□ -1.33
Smc1aQ9CU62 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm14237-201ENSMUST00000122080 430 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Snora47-201ENSMUST00000157483 138 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm17121-201ENSMUST00000170414 847 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm17222-201ENSMUST00000180135 847 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm44221-201ENSMUST00000203552 388 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm6850-201ENSMUST00000210031 530 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm7808-201ENSMUST00000082002 387 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Smc1aQ9CU62 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms