Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm29592-201ENSMUST00000189434 370 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm37135-201ENSMUST00000192652 534 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm38237-201ENSMUST00000193366 376 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm37196-201ENSMUST00000194762 906 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm44463-201ENSMUST00000198895 137 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm45008-201ENSMUST00000206420 493 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm7351-201ENSMUST00000210745 580 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm19212-201ENSMUST00000216642 862 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm15971-201ENSMUST00000119372 211 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm12262-201ENSMUST00000119915 305 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm15181-201ENSMUST00000120142 177 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm11609-201ENSMUST00000121926 793 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm22636-201ENSMUST00000158142 275 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm16298-201ENSMUST00000161107 420 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm22642-201ENSMUST00000175352 252 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm29124-201ENSMUST00000186576 452 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm4322-201ENSMUST00000191094 336 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm8920-201ENSMUST00000196153 924 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm42464-202ENSMUST00000198111 774 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm7492-201ENSMUST00000201745 725 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm44053-201ENSMUST00000203364 929 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm19764-201ENSMUST00000203630 649 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm45405-201ENSMUST00000211544 609 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm6419-201ENSMUST00000097166 429 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.55□□□□□ -1.52
Use1Q9CQ56 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Use1Q9CQ56 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm12939-201ENSMUST00000117303 165 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm12099-201ENSMUST00000118660 750 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm6744-201ENSMUST00000119303 543 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm13998-201ENSMUST00000120952 335 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm11472-201ENSMUST00000121305 556 ntBASIC5.54□□□□□ -1.52
Use1Q9CQ56 Gm13593-201ENSMUST00000121329 692 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms