Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Krt88Q9CPR6 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm23979-201ENSMUST00000104071 128 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm15400-201ENSMUST00000118944 601 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm14732-201ENSMUST00000121372 545 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm22160-201ENSMUST00000158405 328 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm17048-201ENSMUST00000179266 847 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm27186-201ENSMUST00000184223 307 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm18600-201ENSMUST00000207205 505 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm4032-201ENSMUST00000210886 487 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm24029-201ENSMUST00000083928 143 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.28□□□□□ -1.56
Krt88Q9CPR6 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.27□□□□□ -1.57
Krt88Q9CPR6 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Gm14756-201ENSMUST00000116395 240 ntBASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Gm13770-201ENSMUST00000117149 305 ntBASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Krt88Q9CPR6 Gm11445-201ENSMUST00000119101 532 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms